14 Wholesome Blueberry Muffin Recipes

Blueberry muffins are a timeless treat, but often come packed with sugar and unhealthy fats. Thankfully, it’s easier than ever to enjoy these delightful baked goods with a wholesome twist! We’ve gathered 14 creative and healthy blueberry muffin recipes that incorporate nutritious ingredients, smart substitutions, and fantastic flavor combinations. Whether you’re looking for gluten-free, high-protein, or simply a more fiber-rich option, you’ll find a delicious way to enjoy your favorite berry here.

This recipe and accompanying image were created with the help of AI for inspiration and guidance. Results may vary depending on ingredients, equipment, and technique.

1. Blueberry Oat Bran Muffins

Blueberry Oat Bran Muffins

Packed with heart-healthy fiber, these hearty muffins use oat bran and rolled oats for a dense and satisfying texture. Molasses or brown sugar adds a deep richness that pairs well with the fruit.

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2. Greek Yogurt Lemon Blueberry Muffins

Greek Yogurt Lemon Blueberry Muffins

Using plain Greek yogurt adds protein and incredible moisture to the batter without needing excess oil. The addition of fresh lemon zest provides a bright citrus contrast to the sweet blueberries.

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3. Almond Flour Blueberry Muffins

Almond Flour Blueberry Muffins

A grain-free option that relies on almond flour to create a tender, nutty crumb perfect for low-carb diets. These are sweetened lightly with maple syrup to keep the glycemic index lower.

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4. Whole Wheat Honey Blueberry Muffins

Whole Wheat Honey Blueberry Muffins

These muffins swap refined sugar for honey and use 100% whole wheat flour for a wholesome, fiber-rich breakfast treat. They are moist and bursting with fresh berry flavor in every bite.

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5. Zucchini Blueberry Spelt Muffins

Zucchini Blueberry Spelt Muffins

Shredded zucchini disappears into the batter, adding hydration and nutrients without altering the flavor profile. Spelt flour offers a nutty taste that complements the fresh blueberries perfectly.

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6. Avocado Blueberry Dark Chocolate Muffins

Avocado Blueberry Dark Chocolate Muffins

Mashed avocado serves as a nutrient-dense substitute for butter, providing creamy healthy fats. A handful of dark chocolate chips adds antioxidants and a touch of decadence.

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7. Coconut Oil Blueberry Muffins

Coconut Oil Blueberry Muffins

This dairy-free variation uses unrefined coconut oil and coconut sugar for a subtle tropical undertone. The texture is incredibly soft, making them a favorite for those avoiding butter.

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8. High-Protein Ricotta Blueberry Muffins

High-Protein Ricotta Blueberry Muffins

Part-skim ricotta cheese replaces some of the fat and adds a significant protein boost to these fluffy baked goods. The result is a light, airy muffin that feels indulgent but remains nutritious.

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9. Quinoa Flour Blueberry Muffins

Quinoa Flour Blueberry Muffins

Utilizing quinoa flour makes these muffins naturally gluten-free and packed with complete proteins. They have a unique, earthy flavor that balances well with sweet vanilla and berries.

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10. Cinnamon Apple Blueberry Muffins

Cinnamon Apple Blueberry Muffins

Diced apples and warm cinnamon spice join the blueberries for a comforting, autumnal flavor profile. Using applesauce in the batter helps reduce the amount of oil required.

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11. Pumpkin Seed Blueberry Muffins

Pumpkin Seed Blueberry Muffins

Topped with crunchy pepitas (pumpkin seeds), these muffins offer added magnesium and texture. The base uses a mix of whole wheat pastry flour and flaxseed meal for extra nutrition.

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12. Chia Seed Blueberry Lemon Muffins

Chia Seed Blueberry Lemon Muffins

Chia seeds are stirred into the batter to provide omega-3 fatty acids and a fun, poppyseed-like crunch. A glaze made from lemon juice and powdered erythritol keeps them sugar-conscious.

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13. Cottage Cheese Blueberry Power Muffins

Cottage Cheese Blueberry Power Muffins

Blended cottage cheese is the secret ingredient here, adding moisture and high protein content without a cheesy taste. These are ideal for a post-workout snack or a filling breakfast on the go.

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14. Sweet Potato Blueberry Muffins

Sweet Potato Blueberry Muffins

Mashed sweet potato provides a vibrant orange hue, moisture, and plenty of Vitamin A to the batter. The natural earthiness of the root vegetable grounds the tartness of the blueberries.

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